fix: Fix geometry parsing

build/package/Dockerfile

@@ -11,7 +11,8 @@ RUN CGO_ENABLED=0 GOOS=linux go build -trimpath -o /out/gis ./cmd/gis
 
 FROM alpine:3.20
 
-# gdal-tools provides gdal_translate / gdalinfo for raster COG conversion (worker).
+# gdal-tools provides gdal_translate / gdalinfo for raster COG conversion and
+# ogr2ogr for extracting vector feature geometry (worker).
 RUN apk add --no-cache ca-certificates tzdata gdal-tools \
     && adduser -D -u 10001 app
 

internal/raster/gdal.go

@@ -8,6 +8,7 @@ import (
 	"encoding/json"
 	"fmt"
 	"os/exec"
+	"path/filepath"
 	"strings"
 )
 
@@ -56,3 +57,52 @@ func (c *GDALConverter) Footprint(ctx context.Context, src string) ([]byte, erro
 	}
 	return info.Wgs84Extent, nil
 }
+
+// VectorGeometry reads every feature of a vector file and returns their combined
+// geometry as a GeoJSON GeometryCollection reprojected to EPSG:4326, or nil if
+// the file has no features. The caller (PostGIS) dissolves the collection into
+// the union of all features. Zipped ESRI shapefiles are read in place via GDAL's
+// /vsizip/ virtual filesystem; GeoJSON and GeoPackage are read directly.
+func (c *GDALConverter) VectorGeometry(ctx context.Context, src string) ([]byte, error) {
+	input := src
+	if strings.EqualFold(filepath.Ext(src), ".zip") {
+		input = "/vsizip/" + src
+	}
+
+	cmd := exec.CommandContext(ctx, "ogr2ogr",
+		"-f", "GeoJSON",
+		"-t_srs", "EPSG:4326",
+		"/vsistdout/", input,
+	)
+	var stderr strings.Builder
+	cmd.Stderr = &stderr
+	out, err := cmd.Output()
+	if err != nil {
+		return nil, fmt.Errorf("ogr2ogr: %w: %s", err, strings.TrimSpace(stderr.String()))
+	}
+
+	var fc struct {
+		Features []struct {
+			Geometry json.RawMessage `json:"geometry"`
+		} `json:"features"`
+	}
+	if err := json.Unmarshal(out, &fc); err != nil {
+		return nil, fmt.Errorf("parse ogr2ogr output: %w", err)
+	}
+
+	geoms := make([]json.RawMessage, 0, len(fc.Features))
+	for _, f := range fc.Features {
+		if len(f.Geometry) == 0 || string(f.Geometry) == "null" {
+			continue
+		}
+		geoms = append(geoms, f.Geometry)
+	}
+	if len(geoms) == 0 {
+		return nil, nil
+	}
+
+	return json.Marshal(struct {
+		Type       string            `json:"type"`
+		Geometries []json.RawMessage `json:"geometries"`
+	}{Type: "GeometryCollection", Geometries: geoms})
+}

internal/repository/postgres/dataset.go

@@ -139,12 +139,23 @@ func (r *DatasetRepository) MarkConverted(ctx context.Context, id uuid.UUID, cog
 	return nil
 }
 
-// SetProperties stores the extracted attribute table (nil -> NULL) and marks the
+// SetProperties stores the extracted attribute table (nil -> NULL) and the
-// dataset ready.
+// dissolved feature geometry (GeoJSON in EPSG:4326; nil keeps the existing
-func (r *DatasetRepository) SetProperties(ctx context.Context, id uuid.UUID, properties []byte) error {
+// geometry), then marks the dataset ready. The geometry is reduced to the union
+// of all features via ST_UnaryUnion.
+func (r *DatasetRepository) SetProperties(ctx context.Context, id uuid.UUID, properties, geometry []byte) error {
+	var geom any // nil -> SQL NULL -> CASE keeps existing geometry
+	if len(geometry) > 0 {
+		geom = string(geometry)
+	}
 	tag, err := r.pool.Exec(ctx,
-		`UPDATE datasets SET properties = $2, status = $3, parse_error = NULL, updated_at = now() WHERE id = $1`,
+		`UPDATE datasets
-		id, nullableJSON(json.RawMessage(properties)), domain.DatasetStatusReady,
+		 SET properties = $2,
+		     geometry = CASE WHEN $3::text IS NULL THEN geometry
+		                     ELSE ST_UnaryUnion(ST_SetSRID(ST_GeomFromGeoJSON($3), 4326)) END,
+		     status = $4, parse_error = NULL, updated_at = now()
+		 WHERE id = $1`,
+		id, nullableJSON(json.RawMessage(properties)), geom, domain.DatasetStatusReady,
 	)
 	if err != nil {
 		return mapError(err)

internal/service/dataset.go

@@ -33,7 +33,7 @@ type DatasetRepository interface {
 	MarkParseFailed(ctx context.Context, id uuid.UUID, reason string) error
 	MarkReady(ctx context.Context, id uuid.UUID) error
 	MarkConverted(ctx context.Context, id uuid.UUID, cogKey string, footprint []byte) error
-	SetProperties(ctx context.Context, id uuid.UUID, properties []byte) error
+	SetProperties(ctx context.Context, id uuid.UUID, properties, geometry []byte) error
 	SaveMapping(ctx context.Context, id uuid.UUID, katoColumn string, years []domain.YearColumn) (domain.Dataset, error)
 	ReplaceObservations(ctx context.Context, datasetID uuid.UUID, obs []domain.Observation) error
 	ListObservations(ctx context.Context, datasetID uuid.UUID, katoCode *string, limit, offset int) ([]domain.Observation, error)
@@ -82,11 +82,15 @@ type ColumnParser func(filename string, data []byte) ([]domain.AttributeColumn,
 // RowParser reads every attribute row from a file's raw bytes as name->value maps.
 type RowParser func(filename string, data []byte) ([]map[string]string, error)
 
-// RasterConverter converts a raster file to a Cloud-Optimized GeoTIFF and reads
+// RasterConverter converts a raster file to a Cloud-Optimized GeoTIFF, reads its
-// its footprint. It operates on local file paths.
+// footprint, and dissolves a vector file's features into a single geometry. It
+// operates on local file paths.
 type RasterConverter interface {
 	ToCOG(ctx context.Context, srcPath, dstPath string) error
 	Footprint(ctx context.Context, srcPath string) ([]byte, error)
+	// VectorGeometry returns the combined geometry of a vector file's features as
+	// GeoJSON in EPSG:4326 (nil if the file has no features).
+	VectorGeometry(ctx context.Context, srcPath string) ([]byte, error)
 }
 
 // UploadInput carries everything needed to store a new dataset.
@@ -249,10 +253,12 @@ func (s *DatasetService) Reprocess(ctx context.Context, id uuid.UUID) (domain.Da
 	return dataset, nil
 }
 
-// ExtractProperties reads a plain vector dataset's attribute table and stores it
+// ExtractProperties reads a plain vector dataset's attribute table and spatial
-// (as a JSON array of row objects) in the properties column, then marks the
+// geometry and stores them (the attribute table as a JSON array of row objects
-// dataset ready. Invoked by the worker. Parse failures are recorded; storage
+// in the properties column, the dissolved feature geometry in the geometry
-// failures are returned for retry.
+// column), then marks the dataset ready. Invoked by the worker. Parse failures
+// are recorded; storage failures are returned for retry. Geometry extraction is
+// best-effort: a failure leaves geometry unset rather than failing the job.
 func (s *DatasetService) ExtractProperties(ctx context.Context, id uuid.UUID) error {
 	dataset, err := s.repo.GetByID(ctx, id)
 	if err != nil {
@@ -278,7 +284,31 @@ func (s *DatasetService) ExtractProperties(ctx context.Context, id uuid.UUID) er
 			return err
 		}
 	}
-	return s.repo.SetProperties(ctx, id, properties)
+
+	geometry := s.vectorGeometry(ctx, dataset.Filename, data)
+	return s.repo.SetProperties(ctx, id, properties, geometry)
+}
+
+// vectorGeometry dissolves a vector file's features into a single GeoJSON
+// geometry via the converter. It writes the in-memory bytes to a temp file
+// (preserving the extension so the converter detects the format) because the
+// converter operates on file paths. Best-effort: any failure yields nil.
+func (s *DatasetService) vectorGeometry(ctx context.Context, filename string, data []byte) []byte {
+	ext := strings.ToLower(filepath.Ext(filename))
+	f, err := os.CreateTemp("", "gis-vec-*"+ext)
+	if err != nil {
+		return nil
+	}
+	defer os.Remove(f.Name())
+	if _, err := f.Write(data); err != nil {
+		f.Close()
+		return nil
+	}
+	if err := f.Close(); err != nil {
+		return nil
+	}
+	geom, _ := s.converter.VectorGeometry(ctx, f.Name())
+	return geom
 }
 
 // hasAttributeData reports whether any row carries at least one attribute.

internal/service/dataset_test.go

@@ -125,12 +125,15 @@ func (r *stubDatasetRepo) MarkConverted(_ context.Context, id uuid.UUID, cogKey
 	return nil
 }
 
-func (r *stubDatasetRepo) SetProperties(_ context.Context, id uuid.UUID, properties []byte) error {
+func (r *stubDatasetRepo) SetProperties(_ context.Context, id uuid.UUID, properties, geometry []byte) error {
 	d, ok := r.store[id]
 	if !ok {
 		return domain.ErrNotFound
 	}
 	d.Properties = properties
+	if len(geometry) > 0 {
+		d.Geometry = geometry
+	}
 	d.Status = domain.DatasetStatusReady
 	r.store[id] = d
 	return nil
@@ -196,6 +199,8 @@ type stubConverter struct {
 	toCOGErr     error
 	footprint    []byte
 	footprintFn  func(src string) ([]byte, error)
+	vectorGeom   []byte
+	vectorGeomFn func(src string) ([]byte, error)
 }
 
 func (c *stubConverter) ToCOG(_ context.Context, _, dst string) error {
@@ -213,6 +218,13 @@ func (c *stubConverter) Footprint(_ context.Context, src string) ([]byte, error)
 	return c.footprint, nil
 }
 
+func (c *stubConverter) VectorGeometry(_ context.Context, src string) ([]byte, error) {
+	if c.vectorGeomFn != nil {
+		return c.vectorGeomFn(src)
+	}
+	return c.vectorGeom, nil
+}
+
 var (
 	noopParser    ColumnParser = func(string, []byte) ([]domain.AttributeColumn, error) { return nil, nil }
 	noopRowParser RowParser    = func(string, []byte) ([]map[string]string, error) { return nil, nil }
@@ -428,7 +440,9 @@ func TestDatasetService_ExtractProperties(t *testing.T) {
 		{"name": "Almaty", "pop": "2000"},
 	}
 	rp := RowParser(func(string, []byte) ([]map[string]string, error) { return rows, nil })
-	svc := NewDatasetService(repo, &stubStore{}, stubCategoryReader{exists: true}, &stubEnqueuer{}, noopParser, rp, &stubConverter{})
+	geom := []byte(`{"type":"GeometryCollection","geometries":[]}`)
+	conv := &stubConverter{vectorGeom: geom}
+	svc := NewDatasetService(repo, &stubStore{}, stubCategoryReader{exists: true}, &stubEnqueuer{}, noopParser, rp, conv)
 
 	if err := svc.ExtractProperties(context.Background(), id); err != nil {
 		t.Fatalf("unexpected error: %v", err)
@@ -444,6 +458,40 @@ func TestDatasetService_ExtractProperties(t *testing.T) {
 	if len(parsed) != 2 {
 		t.Fatalf("want 2 rows in properties, got %d", len(parsed))
 	}
+	if string(got.Geometry) != string(geom) {
+		t.Fatalf("want geometry %s, got %s", geom, got.Geometry)
+	}
+}
+
+func TestDatasetService_ExtractProperties_GeometryBestEffort(t *testing.T) {
+	id := uuid.New()
+	repo := newStubDatasetRepo()
+	repo.store[id] = domain.Dataset{
+		ID: id, FileType: domain.FileTypeVector,
+		Filename: "d.geojson", StorageKey: "k", Status: domain.DatasetStatusProcessing,
+	}
+	rp := RowParser(func(string, []byte) ([]map[string]string, error) {
+		return []map[string]string{{"name": "Astana"}}, nil
+	})
+	// Geometry extraction fails; the job must still succeed with properties set.
+	conv := &stubConverter{vectorGeomFn: func(string) ([]byte, error) {
+		return nil, errors.New("ogr2ogr boom")
+	}}
+	svc := NewDatasetService(repo, &stubStore{}, stubCategoryReader{exists: true}, &stubEnqueuer{}, noopParser, rp, conv)
+
+	if err := svc.ExtractProperties(context.Background(), id); err != nil {
+		t.Fatalf("unexpected error: %v", err)
+	}
+	got := repo.store[id]
+	if got.Status != domain.DatasetStatusReady {
+		t.Fatalf("want ready, got %q", got.Status)
+	}
+	if got.Geometry != nil {
+		t.Fatalf("expected nil geometry on extraction failure, got %s", got.Geometry)
+	}
+	if got.Properties == nil {
+		t.Fatalf("expected properties to be set despite geometry failure")
+	}
 }
 
 func TestDatasetService_ExtractProperties_NoTable(t *testing.T) {